Agenda

Time	Session	Topics
9:00	Opening and Introduction of the Speaker
9:15	Workshop Overview	Workshop Overview; Praxis AI Platform Access and Usage; Introduction to the Linux Command Line
9:30	Praxis Access and Usage
9:45	An Introduction to the Command Line for Genomics Part-1
10:45	Coffee Break
11:15	An Introduction to the Command Line for Genomics Part-2	Project Management for Genomics; Introducing the Shell; Working with Files and Directories
12:45	LUNCH
2:00	Accessing the Pacific Research Platform Nautilus Kubernetes Cluster to Run Genomics Workflows	Accessing the PRP Kubernetes Cluster; Launching a Pod to View the PVC Filesystem; Moving data into/out of cluster; Running the KINC workflow
4:00	Adjourn

Time	Session	Topics
9:00	Creating a Kubernetes Cluster with CCP	Creating and Accessing an "on-prem" Kubernetes Cluster with CCP
10:45	Coffee Break
11:15	Accessing and Running Jobs on the CCP Cluster (and again on the PRP)	Running the KINC Workflow on the "CCP" and PRP Clusters
12:45	LUNCH
2:00	SEMINAR: Computational Biology Approaches to Improve our Species: From Cancer to Crops
3:15	SEMINAR: Importance of Cyberinfrastructure for Scientific Discovery
4:00	Adjourn

Lead the way

Apply Visit Us Request Information